I noticed the pattern change happening on the first one and initially thought he was coming down with some sort of skin infection.
My reaction exactly

OK, I think I understand the situation.
I treated the entire tank with Melafix and got nine khulis into swimming. I've seen no dangerous signs except for swimming, and they were not swimming for air. In my case the exposure was not very extensive since the entire exercise was to get them to another tank; and I also used very little melafix (I forgot exactly but my general approach would be to put 1/4 of the recommendation (for any med) and then add more if needed..almost certainly this is what I did.)
I'd guess that pattern morphing puts serious stress on the fish and forcing it to swim made things that much worse; so we don't have a conclusive evidence that a normal khuli would get hurt.
Nonetheless, I believe that there is a danger... and now I'm in trouble: I'll need to get my khulis out of the 65g some time within two months and I don't know if this can be done without Melafix...real darn.
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On Martin's paper (Kottelat & Lim): thank you! -- it is interesting, and I read it quickly and will read carefully again. Unf., it does not help with Myersi variations: it is really on other species, and P.semicincta is simply dismissed as an alternative name.
On Semicincta: So far I found nothing like a clear definition of what this is supposed to be; I'll look more, but right now I'm assuming that the "broken pattern" type is not another species. In fact, I'm nearly certain that my "broken pattern" khuli came from Thailand, not Sumatra.
Next post on pattern-changes.